Canvas 1.40.0.1613
Canvas is a tool for calling copy number variants (CNVs) from human DNA sequencing data. It can work either with germline data, or paired tumor/normal samples. Its primary input is aligned reads (in .bam format), and its primary output is a report (in a .vcf file) giving the copy number status of the genome.Accessing Canvas 1.40.0.1613
To load the module for Canvas 1.40.0.1613 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):
📋
module load Canvas/1.40.0.1613
BEAR Apps Version
Architectures
EL8-cascadelake — EL8-icelake — EL8-sapphirerapids
The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
More Information
For more information visit the Canvas website.
Dependencies
This version of Canvas has a direct dependency on: Net-core/2.1.28
Last modified on 30th June 2021