BEAR Applications

BEAR-Python-MSc-Bioinformatics 2020a-foss-2020a-Python-3.8.2

Deprecated: Use of this version of BEAR-Python-MSc-Bioinformatics is deprecated. More information on our Applications Support and Retention Policy.

There is a newer version of BEAR-Python-MSc-Bioinformatics

This module provides access to several Python Data Science libraries.

Accessing BEAR-Python-MSc-Bioinformatics 2020a-foss-2020a-Python-3.8.2

To load the module for BEAR-Python-MSc-Bioinformatics 2020a-foss-2020a-Python-3.8.2 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load BEAR-Python-MSc-Bioinformatics/2020a-foss-2020a-Python-3.8.2

BEAR Apps Version

2018b

Dependencies

This version of BEAR-Python-MSc-Bioinformatics has a direct dependency on: BioServices/1.7.9-foss-2020a-Python-3.8.2 foss/2020a gprofiler-official/1.0.0-foss-2020a-Python-3.8.2 graphviz/0.14.2-foss-2020a-Python-3.8.2 intermine/1.11.0-GCCcore-9.3.0-Python-3.8.2 matplotlib/3.2.1-foss-2020a-Python-3.8.2 mlxtend/0.17.3-foss-2020a-Python-3.8.2 networkx/2.4-foss-2020a-Python-3.8.2 NLTK/3.6.7-foss-2020a-Python-3.8.2 OpenCV/4.4.0-foss-2020a-Python-3.8.2 plotly.py/4.8.1-GCCcore-9.3.0 pyhpo/2.5.0-foss-2020a-Python-3.8.2 Python/3.8.2-GCCcore-9.3.0 scikit-learn/0.23.2-foss-2020a-Python-3.8.2 scikit-plot/0.3.7-foss-2020a-Python-3.8.2 SciPy-bundle/2020.03-foss-2020a-Python-3.8.2 Seaborn/0.11.0-foss-2020a-Python-3.8.2 sequenza-utils/3.0.0-foss-2020a-Python-3.8.2-R-4.0.0 statsmodels/0.11.1-foss-2020a-Python-3.8.2 TensorFlow/2.3.1-foss-2020a-Python-3.8.2 wittgenstein/0.2.3-foss-2020a-Python-3.8.2

Other Versions

These versions of BEAR-Python-MSc-Bioinformatics are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 2nd November 2020