BEAR-Python-MSc-Bioinformatics 2022b-foss-2022b

Deprecated: Use of this version of BEAR-Python-MSc-Bioinformatics is deprecated. More information on our Applications Support and Retention Policy.

This module provides access to several Python Data Science libraries.

Accessing BEAR-Python-MSc-Bioinformatics 2022b-foss-2022b

To load the module for BEAR-Python-MSc-Bioinformatics 2022b-foss-2022b please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load BEAR-Python-MSc-Bioinformatics/2022b-foss-2022b

BEAR Apps Version

2018b

Dependencies

This version of BEAR-Python-MSc-Bioinformatics has a direct dependency on: BioServices/1.11.2-foss-2022b foss/2022b gprofiler-official/1.0.0-foss-2022b graphviz/0.20.1-foss-2022b intermine/1.13.0-GCCcore-12.2.0 matplotlib/3.7.0-gfbf-2022b mlxtend/0.22.0-gfbf-2022b mvlearn/0.5.0-foss-2022b networkx/3.0-gfbf-2022b NLTK/3.8.1-foss-2022b OpenCV/4.8.0-foss-2022b-contrib plotly.py/5.13.1-GCCcore-12.2.0 pyhpo/3.2.2-gfbf-2022b Python/3.10.8-GCCcore-12.2.0 scikit-image/0.21.0-foss-2022b scikit-learn/1.2.1-gfbf-2022b scikit-plot/0.3.7-foss-2022b SciPy-bundle/2023.02-gfbf-2022b Seaborn/0.12.2-foss-2022b sequenza-utils/3.0.0-foss-2022b statsmodels/0.14.0-gfbf-2022b wittgenstein/0.3.4-foss-2022b

Other Versions

These versions of BEAR-Python-MSc-Bioinformatics are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 27th July 2023