BEDTools 2.30.0-GCC-10.2.0
Deprecated: Use of this version of BEDTools is deprecated. More information on our Applications Support and Retention Policy.
There is a newer version of BEDTools
The BEDTools utilities allow one to address common genomics tasks such as finding feature overlaps and computing coverage. The utilities are largely based on four widely-used file formats: BED, GFF/GTF, VCF, and SAM/BAM.Accessing BEDTools 2.30.0-GCC-10.2.0
To load the module for BEDTools 2.30.0-GCC-10.2.0 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):
module load BEDTools/2.30.0-GCC-10.2.0
BEAR Apps Version
More Information
For more information visit the BEDTools website.
Dependencies
This version of BEDTools has a direct dependency on: BamTools/2.5.1-GCC-10.2.0 bzip2/1.0.8-GCCcore-10.2.0 GCC/10.2.0 XZ/5.2.5-GCCcore-10.2.0 zlib/1.2.11-GCCcore-10.2.0
Other Versions
These versions of BEDTools are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.
| Version | BEAR Apps Version |
|---|---|
| 2.30.0-GCC-11.3.0 | 2022a |
| 2.30.0-GCC-11.2.0 | 2021b |
| 2.30.0-GCC-10.3.0 | 2021a |
| 2.29.2-GCC-9.3.0 | 2020a |
| 2.29.2-GCC-8.3.0 | 2019b |
| 2.28.0-GCC-8.2.0-2.31.1 | 2019a |
| 2.25.0-foss-2018b | 2018b |
Last modified on 26th August 2022