Deprecated: Use of this version of Bio-MLST-Check is deprecated. More information on our Applications Support and Retention Policy.High throughput multilocus sequence typing (MLST) checking.
Accessing Bio-MLST-Check 2.1.1706216-foss-2018b-Perl-5.28.0
To load the module for Bio-MLST-Check 2.1.1706216-foss-2018b-Perl-5.28.0 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):
module load Bio-MLST-Check/2.1.1706216-foss-2018b-Perl-5.28.0
BEAR Apps Version
The listed architectures consist of two part: OS-CPU.
- BlueBEAR: The OS used on BlueBEAR is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
- BEAR and CaStLeS Cloud VMs: These VMs can have one of two OSes. Those with access to a BEAR Cloud or CaStLeS VM should check that the listed architectures for an application include the OS of VM being used. The VMs, irrespective of OS, will use the haswell CPU type.
For more information visit the Bio-MLST-Check website.
This version of Bio-MLST-Check has a direct dependency on: BioPerl/1.7.2-foss-2018b-Perl-5.28.0 BLAST+/2.8.1-foss-2018b Env-Path/0.19-foss-2018b-Perl-5.28.0 File-Touch/0.11-foss-2018b-Perl-5.28.0 foss/2018b LWP-Protocol-https/6.07-foss-2018b-Perl-5.28.0 Parallel-ForkManager/2.02-foss-2018b-Perl-5.28.0 Perl/5.28.0-GCCcore-7.3.0 String-Util/1.26-foss-2018b-Perl-5.28.0 Test-MockModule/v0.170.0-foss-2018b-Perl-5.28.0 XML-LibXML/2.0132-GCCcore-7.3.0-Perl-5.28.0
Last modified on 3rd June 2019