BioServices 1.11.2-foss-2022b

Deprecated: Use of this version of BioServices is deprecated. More information on our Applications Support and Retention Policy.

Bioservices is a Python package that provides access to many Bioinformatices Web Services (e.g., UniProt) and a framework to easily implement Web Services wrappers (based on WSDL/SOAP or REST protocols).

Accessing BioServices 1.11.2-foss-2022b

To load the module for BioServices 1.11.2-foss-2022b please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load BioServices/1.11.2-foss-2022b

BEAR Apps Version

2018b

Extensions

  • BioServices 1.11.2
  • cattrs 23.1.2
  • colorlog 6.7.0
  • easydev 0.12.1
  • gevent 23.7.0
  • greenlet 2.0.2
  • grequests 0.7.0
  • requests_cache 1.1.0
  • suds-community-1.1.2
  • url-normalize-1.4.3
  • wrapt 1.15.0
  • xmltodict 0.13.0
  • zope.event 5.0
  • zope.interface 6.0

More Information

For more information visit the BioServices website.

Dependencies

This version of BioServices has a direct dependency on: BeautifulSoup/4.11.1-GCCcore-12.2.0 foss/2022b lxml/4.9.2-GCCcore-12.2.0 matplotlib/3.7.0-gfbf-2022b Python/3.10.8-GCCcore-12.2.0 scikit-learn/1.2.1-gfbf-2022b SciPy-bundle/2023.02-gfbf-2022b tqdm/4.64.1-GCCcore-12.2.0

Required By

This version of BioServices is a direct dependent of: BEAR-Python-MSc-Bioinformatics/2022b-foss-2022b

Other Versions

These versions of BioServices are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 9th August 2023