CAGEr 1.34.0-foss-2021a-R-4.1.0

Deprecated: Use of this version of CAGEr is deprecated. More information on our Applications Support and Retention Policy.

Analysis of CAGE (Cap Analysis of Gene Expression) sequencing data for precise mapping of transcription start sites and promoterome mining

Accessing CAGEr 1.34.0-foss-2021a-R-4.1.0

To load the module for CAGEr 1.34.0-foss-2021a-R-4.1.0 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load CAGEr/1.34.0-foss-2021a-R-4.1.0

BEAR Apps Version

2018b

Extensions

  • CAGEr 1.34.0
  • MultiAssayExperiment 1.18.0

More Information

For more information visit the CAGEr website.

Dependencies

This version of CAGEr has a direct dependency on: foss/2021a R/4.1.0-foss-2021a R-bundle-Bioconductor/3.13-foss-2021a-R-4.1.0

Last modified on 9th May 2022