CellChat 20210814-foss-2020a-R-4.0.0

Deprecated: Use of this version of CellChat is deprecated. More information on our Applications Support and Retention Policy.

R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data.

Accessing CellChat 20210814-foss-2020a-R-4.0.0

To load the module for CellChat 20210814-foss-2020a-R-4.0.0 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load CellChat/20210814-foss-2020a-R-4.0.0

BEAR Apps Version

2018b

Extensions

  • CellChat 20210814
  • circlize 0.4.13
  • cpp11 0.4.0
  • ggalluvial 0.12.3
  • GlobalOptions 0.1.2
  • NMF 0.23.0
  • svglite 2.0.0
  • systemfonts 1.0.2

More Information

For more information visit the CellChat website.

Dependencies

This version of CellChat has a direct dependency on: foss/2020a R/4.0.0-foss-2020a R-bundle-Bioconductor/3.11-foss-2020a-R-4.0.0

Other Versions

These versions of CellChat are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Version BEAR Apps Version
1.6.0-foss-2021b-R-4.2.0 2021b

Last modified on 5th October 2021