DCC 0.5.0-foss-2021b

Deprecated: Use of this version of DCC is deprecated. More information on our Applications Support and Retention Policy.

DCC is a python package intended to detect and quantify circRNAs with high specificity. DCC works with the STAR (Dobin et al., 2013) chimeric.out.junction files which contains chimerically aligned reads including circRNA junction spanning reads.

Accessing DCC 0.5.0-foss-2021b

To load the module for DCC 0.5.0-foss-2021b please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load DCC/0.5.0-foss-2021b

BEAR Apps Version

2018b

More Information

For more information visit the DCC website.

Dependencies

This version of DCC has a direct dependency on: foss/2021b HTSeq/0.11.3-foss-2021b Pysam/0.17.0-GCC-11.2.0 Python/3.9.6-GCCcore-11.2.0 SciPy-bundle/2021.10-foss-2021b

Last modified on 20th July 2022