GMAP-GSNAP 2020-09-12-foss-2019b

Deprecated: Use of this version of GMAP-GSNAP is deprecated. More information on our Applications Support and Retention Policy.

GMAP: A Genomic Mapping and Alignment Program for mRNA and EST Sequences GSNAP: Genomic Short-read Nucleotide Alignment Program

Accessing GMAP-GSNAP 2020-09-12-foss-2019b

To load the module for GMAP-GSNAP 2020-09-12-foss-2019b please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load GMAP-GSNAP/2020-09-12-foss-2019b

BEAR Apps Version

2018b

More Information

For more information visit the GMAP-GSNAP website.

Dependencies

This version of GMAP-GSNAP has a direct dependency on: bzip2/1.0.8-GCCcore-8.3.0 foss/2019b zlib/1.2.11-GCCcore-8.3.0

Required By

This version of GMAP-GSNAP is a direct dependent of: funannotate/1.8.1-foss-2019b-Python-2.7.16 funannotate/1.8.1-foss-2019b-Python-3.7.4 PASApipeline/2.4.1-foss-2019b

Other Versions

These versions of GMAP-GSNAP are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Version BEAR Apps Version
2019-02-15-foss-2018b 2018b

Last modified on 12th October 2020