MAJIQ 2.2-foss-2020a-54fd98d-Python-3.8.2

Deprecated: Use of this version of MAJIQ is deprecated. More information on our Applications Support and Retention Policy.

MAJIQ and Voila are two software packages that together detect, quantify, and visualize local splicing variations (LSV) from RNA-Seq data.

Accessing MAJIQ 2.2-foss-2020a-54fd98d-Python-3.8.2

To load the module for MAJIQ 2.2-foss-2020a-54fd98d-Python-3.8.2 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load MAJIQ/2.2-foss-2020a-54fd98d-Python-3.8.2

BEAR Apps Version

2018b

Extensions

  • Click 7.0
  • Cython 0.29.14
  • Flask 1.0.2
  • Flask-Session-0.3.1
  • Flask-WTF-0.14.2
  • gitdb2 2.0.6
  • GitPython 3.0.5
  • gunicorn 19.9.0
  • itsdangerous 1.1.0
  • Jinja2 2.11.1
  • MAJIQ 2.2
  • numpy 1.18.1
  • psutil 5.6.7
  • smmap2 2.0.5
  • waitress 1.1.0
  • Werkzeug 0.16.0
  • WTForms 2.2.1

More Information

For more information visit the MAJIQ website.

Dependencies

This version of MAJIQ has a direct dependency on: foss/2020a h5py/2.10.0-foss-2020a-Python-3.8.2 HTSlib/1.10.2-GCC-9.3.0 Python/3.8.2-GCCcore-9.3.0 SciPy-bundle/2020.03-foss-2020a-Python-3.8.2

Last modified on 25th February 2021