Deprecated: Use of this version of MaSuRCA is deprecated. More information on our Applications Support and Retention Policy.MaSuRCA is whole genome assembly software. It combines the efficiency of the de Bruijn graph and Overlap-Layout-Consensus (OLC) approaches.
Accessing MaSuRCA 3.3.2b-foss-2018b-Perl-5.28.0
To load the module for MaSuRCA 3.3.2b-foss-2018b-Perl-5.28.0 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):
module load MaSuRCA/3.3.2b-foss-2018b-Perl-5.28.0
BEAR Apps Version
EL8-cascadelake — EL8-haswell — Ubuntu20.04-haswell
The listed architectures consist of two part: OS-CPU.
- BlueBEAR: The OS used on BlueBEAR is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
- BEAR and CaStLeS Cloud VMs: These VMs can have one of two OSes. Those with access to a BEAR Cloud or CaStLeS VM should check that the listed architectures for an application include the OS of VM being used. The VMs, irrespective of OS, will use the haswell CPU type.
For more information visit the MaSuRCA website.
This version of MaSuRCA has a direct dependency on: Boost/1.67.0-foss-2018b foss/2018b libreadline/7.0-GCCcore-7.3.0 Perl/5.28.0-GCCcore-7.3.0 Tcl/8.6.8-GCCcore-7.3.0 zlib/1.2.11-GCCcore-7.3.0
Last modified on 5th June 2019