BEAR Applications

MetaPhlAn 3.0.14-foss-2021b

Deprecated: Use of this version of MetaPhlAn is deprecated. More information on our Applications Support and Retention Policy.

MetaPhlAn is a computational tool for profiling the composition of microbial communities from metagenomic shotgun sequencing data

Accessing MetaPhlAn 3.0.14-foss-2021b

To load the module for MetaPhlAn 3.0.14-foss-2021b please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load MetaPhlAn/3.0.14-foss-2021b

BEAR Apps Version

2018b

More Information

For more information visit the MetaPhlAn website.

Dependencies

This version of MetaPhlAn has a direct dependency on: biom-format/2.1.12-foss-2021b Biopython/1.79-foss-2021b CMSeq/1.0.4-foss-2021b DendroPy/4.5.2-GCCcore-11.2.0 foss/2021b h5py/3.6.0-foss-2021b PhyloPhlAn/3.0.2-foss-2021b Pysam/0.18.0-GCC-11.2.0 Python/3.9.6-GCCcore-11.2.0 SciPy-bundle/2021.10-foss-2021b

Last modified on 14th July 2022