Monocle3 0.2.1-foss-2019b-R-3.6.2

Deprecated: Use of this version of Monocle3 is deprecated. More information on our Applications Support and Retention Policy.

There is a newer version of Monocle3

An analysis toolkit for single-cell RNA-seq.

Accessing Monocle3 0.2.1-foss-2019b-R-3.6.2

To load the module for Monocle3 0.2.1-foss-2019b-R-3.6.2 please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load Monocle3/0.2.1-foss-2019b-R-3.6.2

BEAR Apps Version

2018b

Extensions

  • furrr 0.1.0
  • grr 0.9.5
  • leidenbase 0.1.0
  • Matrix.utils 0.9.8
  • Monocle3 0.2.1
  • pbmcapply 1.5.0
  • RhpcBLASctl-0.20-17
  • rsample 0.0.6
  • spdep-1.1-3
  • speedglm-0.3-2
  • uwot 0.1.8

More Information

For more information visit the Monocle3 website.

Dependencies

This version of Monocle3 has a direct dependency on: foss/2019b R/3.6.2-foss-2019b R-bundle-Bioconductor/3.10-foss-2019b-R-3.6.2 sf/0.9-0-foss-2019b-R-3.6.2

Required By

This version of Monocle3 is a direct dependent of: BEAR-R-bio/2019b-foss-2019b-R-3.6.2

Other Versions

These versions of Monocle3 are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Version BEAR Apps Version
1.0.0-foss-2020b-R-4.0.3 2020b

Last modified on 4th May 2020