MotionCor2 1.3.2-GCCcore-8.3.0

Deprecated: Use of this version of MotionCor2 is deprecated. More information on our Applications Support and Retention Policy.

There is a newer version of MotionCor2

MotionCor2 correct anisotropic image motion at the single pixel level across the whole frame, suitable for both single particle and tomographic images. Iterative, patch-based motion detection is combined with spatial and temporal constraints and dose weighting. Cite publication: Shawn Q. Zheng, Eugene Palovcak, Jean-Paul Armache, Yifan Cheng and David A. Agard (2016) Anisotropic Correction of Beam-induced Motion for Improved Single-particle Electron Cryo-microscopy, Nature Methods, submitted. BioArxiv: https://biorxiv.org/content/early/2016/07/04/061960

Accessing MotionCor2 1.3.2-GCCcore-8.3.0

To load the module for MotionCor2 1.3.2-GCCcore-8.3.0 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load MotionCor2/1.3.2-GCCcore-8.3.0

BEAR Apps Version

2018b

More Information

For more information visit the MotionCor2 website.

Dependencies

This version of MotionCor2 has a direct dependency on: GCCcore/8.3.0 jbigkit/2.1-GCCcore-8.3.0 libjpeg-turbo/2.0.3-GCCcore-8.3.0 LibTIFF/4.0.10-GCCcore-8.3.0 XZ/5.2.4-GCCcore-8.3.0 zlib/1.2.11-GCCcore-8.3.0

Required By

This version of MotionCor2 is a direct dependent of: RELION/3.1.1-fosscuda-2019b

Other Versions

These versions of MotionCor2 are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 2nd December 2020