Deprecated: Use of this version of PLINK is deprecated. More information on our Applications Support and Retention Policy.PLINK is a free, open-source whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a computationally efficient manner. The focus of PLINK is purely on analysis of genotype/phenotype data, so there is no support for steps prior to this (e.g. study design and planning, generating genotype or CNV calls from raw data). Through integration with gPLINK and Haploview, there is some support for the subsequent visualization, annotation and storage of results.
Accessing PLINK 2.00-alpha2-x86_64
To load the module for PLINK 2.00-alpha2-x86_64 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):
module load PLINK/2.00-alpha2-x86_64
BEAR Apps Version
For more information visit the PLINK website.
This version of PLINK is a direct dependent of: flashpca/20200910-foss-2019b
These versions of PLINK are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.
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Last modified on 8th August 2019