Python 3.8.2-GCCcore-9.3.0

Deprecated: Use of this version of Python is deprecated. More information on our Applications Support and Retention Policy.

There is a newer version of Python

Python is a programming language that lets you work more quickly and integrate your systems more effectively.

Accessing Python 3.8.2-GCCcore-9.3.0

To load the module for Python 3.8.2-GCCcore-9.3.0 please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load Python/3.8.2-GCCcore-9.3.0

BEAR Apps Version

2018b

Extensions

  • alabaster 0.7.12
  • appdirs 1.4.3
  • asn1crypto 1.3.0
  • atomicwrites 1.3.0
  • attrs 19.3.0
  • Babel 2.8.0
  • bcrypt 3.1.7
  • bitstring 3.1.6
  • blist 1.3.6
  • certifi 2020.4.5.1
  • cffi 1.14.0
  • chardet 3.0.4
  • click 7.1.1
  • cryptography 2.9.2
  • Cython 0.29.16
  • decorator 4.4.2
  • distlib 0.3.0
  • docopt 0.6.2
  • docutils 0.16
  • ecdsa 0.15
  • filelock 3.0.12
  • future 0.18.2
  • idna 2.9
  • imagesize 1.2.0
  • importlib_metadata 1.6.0
  • ipaddress 1.0.23
  • Jinja2 2.11.2
  • joblib 0.14.1
  • liac-arff-2.4.0
  • MarkupSafe 1.1.1
  • mock 4.0.1
  • more-itertools-8.2.0
  • netaddr 0.7.19
  • netifaces 0.10.9
  • nose 1.3.7
  • packaging 20.3
  • paramiko 2.7.1
  • pathlib2 2.3.5
  • paycheck 1.0.2
  • pbr 5.4.5
  • pip 20.0.2
  • pluggy 0.13.1
  • psutil 5.7.0
  • py 1.8.1
  • py_expression_eval 0.3.9
  • pyasn1 0.4.8
  • pycparser 2.20
  • pycrypto 2.6.1
  • Pygments 2.5.2
  • PyNaCl 1.3.0
  • pyparsing 2.4.7
  • pytest 5.4.1
  • python-dateutil-2.8.1
  • pytz 2019.3
  • requests 2.23.0
  • scandir 1.10.0
  • setuptools 45.2.0
  • setuptools_scm 3.5.0
  • six 1.14.0
  • snowballstemmer 2.0.0
  • Sphinx 3.0.2
  • sphinxcontrib-applehelp-1.0.2
  • sphinxcontrib-devhelp-1.0.2
  • sphinxcontrib-htmlhelp-1.0.3
  • sphinxcontrib-jsmath-1.0.1
  • sphinxcontrib-qthelp-1.0.3
  • sphinxcontrib-serializinghtml-1.1.4
  • sphinxcontrib-websupport-1.2.1
  • tabulate 0.8.7
  • toml 0.10.0
  • ujson 2.0.3
  • urllib3 1.25.9
  • virtualenv 20.0.18
  • wcwidth 0.1.9
  • wheel 0.34.2
  • xlrd 1.2.0
  • zipp 1.2.0

More Information

For more information visit the Python website.

Dependencies

This version of Python has a direct dependency on: binutils/2.34-GCCcore-9.3.0 bzip2/1.0.8-GCCcore-9.3.0 GCCcore/9.3.0 GMP/6.2.0-GCCcore-9.3.0 libffi/3.3-GCCcore-9.3.0 libreadline/8.0-GCCcore-9.3.0 ncurses/6.2-GCCcore-9.3.0 SQLite/3.31.1-GCCcore-9.3.0 XZ/5.2.5-GCCcore-9.3.0 zlib/1.2.11-GCCcore-9.3.0

Required By

This version of Python is a direct dependent of: Amber/20.13-AmberTools-21.12-fosscuda-2020a-Python-3.8.2 Amber/20.13-AmberTools-21.12-foss-2020a-Python-3.8.2 Amber/20.9-AmberTools-20.14-foss-2020a-Python-3.8.2 Amber/20.9-AmberTools-20.14-fosscuda-2020a-Python-3.8.2 archspec/0.1.0-GCCcore-9.3.0-Python-3.8.2 astropy/4.0-foss-2020a-Python-3.8.2 autograd/1.3-foss-2020a-Python-3.8.2 Barracuda_Virtual_Reactor/20.1.0-GCCcore-9.3.0-Python-3.8.2 BEAR-Python-DataScience/2020a-foss-2020a-Python-3.8.2 BEAR-Python-MSc-Bioinformatics/2020a-foss-2020a-Python-3.8.2 BeautifulSoup/4.9.1-GCCcore-9.3.0-Python-3.8.2 Biopython/1.78-foss-2020a-Python-3.8.2 BioServices/1.7.9-foss-2020a-Python-3.8.2 bokeh/2.0.2-foss-2020a-Python-3.8.2 bokeh/2.0.2-fosscuda-2020a-Python-3.8.2 Boost.Python/1.72.0-gompic-2020a Boost.Python/1.72.0-gompi-2020a CGAL/4.14.3-gompi-2020a-Python-3.8.2 clust/1.12.0-foss-2020a-Python-3.8.2 CNVkit/0.9.8-foss-2020a-Python-3.8.2-R-4.0.0 dask/2.18.1-fosscuda-2020a-Python-3.8.2 dask/2.18.1-foss-2020a-Python-3.8.2 deepTools/3.5.0-foss-2020a-Python-3.8.2 dm-tree/0.1.6-GCCcore-9.3.0-Python-3.8.2 DROP/1.0.3-foss-2020a-Python-3.8.2-R-4.0.0 eccodes-python/1.2.0-foss-2020a-Python-3.8.2 GATK/4.1.5.0-GCCcore-9.3.0-Java-11 GDAL/3.0.4-foss-2020a-Python-3.8.2 gensim/4.0.1-foss-2020a-Python-3.8.2 GEOS/3.8.1-GCC-9.3.0-Python-3.8.2 GitPython/3.1.9-GCCcore-9.3.0-Python-3.8.2 gmpy2/2.1.0b5-GCC-9.3.0 gmsh/4.7.1-foss-2020a-Python-3.8.2 GObject-Introspection/1.64.0-GCCcore-9.3.0-Python-3.8.2 gprofiler-official/1.0.0-foss-2020a-Python-3.8.2 graphviz/0.14.2-foss-2020a-Python-3.8.2 GROMACS/2021.2-fosscuda-2020a-Python-3.8.2 gwpv/0.2.0-foss-2020a-Python-3.8.2 h5py/2.10.0-foss-2020a-Python-3.8.2 h5py/2.10.0-fosscuda-2020a-Python-3.8.2 Horovod/0.21.1-fosscuda-2020a-TensorFlow-2.3.1-Python-3.8.2 HTSeq/0.13.5-foss-2020a-Python-3.8.2 intermine/1.11.0-GCCcore-9.3.0-Python-3.8.2 IPython/7.13.0-fosscuda-2020a-Python-3.8.2 IPython/7.13.0-foss-2020a-Python-3.8.2 IRkernel/1.1-foss-2020a-R-4.0.0-Python-3.8.2 iterativeWGCNA/1.1.6-foss-2020a-Python-3.8.2-R-4.0.0 JupyterLab/2.2.8-foss-2020a-Python-3.8.2 kmodes/0.11.0-foss-2020a-Python-3.8.2 LAMMPS/3Mar2020-foss-2020a-Python-3.8.2-kokkos LAMMPS/29Oct2020-fosscuda-2020a-Python-3.8.2-kokkos LAMMPS/3Mar2020-fosscuda-2020a-Python-3.8.2-kokkos LAMMPS/29Oct2020-foss-2020a-Python-3.8.2-kokkos lxml/4.5.2-GCCcore-9.3.0 MACS2/2.2.7.1-foss-2020a-Python-3.8.2 MAJIQ/2.2-foss-2020a-54fd98d-Python-3.8.2 Mako/1.1.2-GCCcore-9.3.0 matplotlib/3.2.1-foss-2020a-Python-3.8.2 matplotlib/3.2.1-fosscuda-2020a-Python-3.8.2 Meep/1.17.1-foss-2020a-Python-3.8.2 Meson/0.53.2-GCCcore-9.3.0-Python-3.8.2 MIRTK/20210104-fosscuda-2020a-Python-3.8.2 MIRTK/20210104-foss-2020a-Python-3.8.2 mlxtend/0.17.3-foss-2020a-Python-3.8.2 molmod/1.4.5-fosscuda-2020a-Python-3.8.2 molmod/1.4.5-foss-2020a-Python-3.8.2 MPB/1.11.1-foss-2020a-Python-3.8.2 netcdf4-python/1.5.3-foss-2020a-Python-3.8.2 networkx/2.4-fosscuda-2020a-Python-3.8.2 networkx/2.4-foss-2020a-Python-3.8.2 NiBabel/3.2.1-fosscuda-2020a-Python-3.8.2 NiBabel/3.2.1-foss-2020a-Python-3.8.2 NLopt/2.6.1-foss-2020a-Python-3.8.2 NLTK/3.6.7-foss-2020a-Python-3.8.2 numba/0.50.0-foss-2020a-Python-3.8.2 OpenCV/4.4.0-fosscuda-2020a-Python-3.8.2 OpenCV/4.4.0-foss-2020a-Python-3.8.2 ParaView/5.8.0-foss-2020a-Python-3.8.2-mpi-offscreen pept/0.3.2-foss-2020a-Python-3.8.2 pept/0.2.4-foss-2020a-Python-3.8.2 PETSc/3.12.4-foss-2020a-Python-3.8.2 PHATE/1.0.7-foss-2020a-Python-3.8.2 phateR/1.0.7-foss-2020a-R-4.0.0-Python-3.8.2 PICI-LIGGGHTS/20210424-foss-2020a-Python-3.8.2 PICI-LIGGGHTS/20210202-foss-2020a-Python-3.8.2 Pillow/7.0.0-GCCcore-9.3.0-Python-3.8.2 pkgconfig/1.5.1-GCCcore-9.3.0-Python-3.8.2 plotly.py/4.8.1-GCCcore-9.3.0 PLUMED/2.6.0-foss-2020a-Python-3.8.2 PLUMED/2.6.0-fosscuda-2020a-Python-3.8.2 protobuf-python/3.17.3-fosscuda-2020a-Python-3.8.2 protobuf-python/3.13.0-fosscuda-2020a-Python-3.8.2 protobuf-python/3.13.0-foss-2020a-Python-3.8.2 pybind11/2.4.3-GCCcore-9.3.0-Python-3.8.2 pydicom/2.1.2-GCCcore-9.3.0-Python-3.8.2 pygrib/2.1.3-foss-2020a-Python-3.8.2 pyhpo/2.5.0-foss-2020a-Python-3.8.2 PyMC3/3.8-foss-2020a-Python-3.8.2 pyproj/2.6.1.post1-GCCcore-9.3.0-Python-3.8.2 PyQt5/5.15.1-GCCcore-9.3.0-Python-3.8.2 Pysam/0.16.0.1-GCC-9.3.0 python-bioformats/4.0.0-foss-2020a-Python-3.8.2 PyYAML/5.3-GCCcore-9.3.0 Ray-project/1.4.0-fosscuda-2020a-Python-3.8.2 refnx/0.1.19-foss-2020a-Python-3.8.2 RGT/0.13.2-foss-2020a-Python-3.8.2 ROOT/6.24.06-foss-2020a-Python-3.8.2 rpy2/3.3.6-foss-2020a-Python-3.8.2 scikit-build/0.10.0-fosscuda-2020a-Python-3.8.2 scikit-image/0.17.1-fosscuda-2020a-Python-3.8.2 scikit-image/0.17.1-foss-2020a-Python-3.8.2 scikit-learn/0.23.2-foss-2020a-Python-3.8.2 scikit-plot/0.3.7-foss-2020a-Python-3.8.2 SciPy-bundle/2020.03-foss-2020a-Python-3.8.2 SciPy-bundle/2020.03-fosscuda-2020a-Python-3.8.2 Seaborn/0.11.0-foss-2020a-Python-3.8.2 sequenza-utils/3.0.0-foss-2020a-Python-3.8.2-R-4.0.0 sf/0.9-5-foss-2020a-R-4.0.0-Python-3.8.2 SICER2/1.0.3-foss-2020a-Python-3.8.2 SLEPc/3.12.2-foss-2020a-Python-3.8.2 snakemake/5.31.1-foss-2020a-Python-3.8.2 SPAdes/3.14.1-GCC-9.3.0-Python-3.8.2 spdep/1.1-5-foss-2020a-R-4.0.0-Python-3.8.2 statsmodels/0.11.1-foss-2020a-Python-3.8.2 sympy/1.6.2-foss-2020a-Python-3.8.2 TensorFlow/2.3.1-foss-2020a-Python-3.8.2 TensorFlow/2.3.1-fosscuda-2020a-Python-3.8.2 TensorFlow_Addons/0.11.2-foss-2020a-Python-3.8.2 TensorFlow_Addons/0.11.2-fosscuda-2020a-Python-3.8.2 Theano/1.0.4-foss-2020a-Python-3.8.2 Tkinter/3.8.2-GCCcore-9.3.0 tqdm/4.47.0-GCCcore-9.3.0 VTK/8.2.0-foss-2020a-Python-3.8.2 VTK/8.2.0-fosscuda-2020a-Python-3.8.2 wittgenstein/0.2.3-foss-2020a-Python-3.8.2 xarray/0.16.1-foss-2020a-Python-3.8.2 yaff/1.6.0-fosscuda-2020a-Python-3.8.2 yaff/1.6.0-foss-2020a-Python-3.8.2

Other Versions

These versions of Python are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 29th May 2020