BEAR Applications

RNA_MUTECT 1.0-foss-2019a

Deprecated: Use of this version of RNA_MUTECT is deprecated. More information on our Applications Support and Retention Policy.

RNA-MuTect pipeline

Accessing RNA_MUTECT 1.0-foss-2019a

To load the module for RNA_MUTECT 1.0-foss-2019a please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load RNA_MUTECT/1.0-foss-2019a

BEAR Apps Version

2018b

More Information

For more information visit the RNA_MUTECT website.

Dependencies

This version of RNA_MUTECT has a direct dependency on: BamTools/2.5.1-foss-2019a foss/2019a HISAT2/2.1.0-foss-2019a MCR/R2016a MuTect/1.1.7-Java-11 PLINKSEQ/0.10-GCC-8.2.0-2.31.1 SAMtools/1.9-GCC-8.2.0-2.31.1

Last modified on 1st August 2019