SRA-Toolkit 2.10.9-gompi-2020b

Deprecated: Use of this version of SRA-Toolkit is deprecated. More information on our Applications Support and Retention Policy.

The SRA Toolkit, and the source-code SRA System Development Kit (SDK), will allow you to programmatically access data housed within SRA and convert it from the SRA format

Accessing SRA-Toolkit 2.10.9-gompi-2020b

To load the module for SRA-Toolkit 2.10.9-gompi-2020b please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load SRA-Toolkit/2.10.9-gompi-2020b

BEAR Apps Version

2018b

More Information

For more information visit the SRA-Toolkit website.

Dependencies

This version of SRA-Toolkit has a direct dependency on: file/5.39-GCCcore-10.2.0 gompi/2020b HDF5/1.10.7-gompi-2020b libxml2/2.9.10-GCCcore-10.2.0 NGS/2.10.9-GCCcore-10.2.0

Other Versions

These versions of SRA-Toolkit are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 23rd September 2022