Unicycler 0.5.0-gompi-2021b

Deprecated: Use of this version of Unicycler is deprecated. More information on our Applications Support and Retention Policy.

Unicycler is an assembly pipeline for bacterial genomes. It can assemble Illumina-only read sets where it functions as a SPAdes-optimiser. It can also assembly long-read-only sets (PacBio or Nanopore) where it runs a miniasm+Racon pipeline.

Accessing Unicycler 0.5.0-gompi-2021b

To load the module for Unicycler 0.5.0-gompi-2021b please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load Unicycler/0.5.0-gompi-2021b

BEAR Apps Version

2018b

More Information

For more information visit the Unicycler website.

Dependencies

This version of Unicycler has a direct dependency on: BLAST+/2.12.0-gompi-2021b gompi/2021b Python/3.9.6-GCCcore-11.2.0 Racon/1.5.0-GCCcore-11.2.0 SPAdes/3.15.3-GCC-11.2.0

Required By

This version of Unicycler is a direct dependent of: ecc_finder/1.0.0_20221007_67d06f3-foss-2021b

Last modified on 17th October 2022