aicsimageio 4.9.4-foss-2021b

Deprecated: Use of this version of aicsimageio is deprecated. More information on our Applications Support and Retention Policy.

Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Pure Python

Accessing aicsimageio 4.9.4-foss-2021b

To load the module for aicsimageio 4.9.4-foss-2021b please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load aicsimageio/4.9.4-foss-2021b

BEAR Apps Version

2018b

Extensions

  • aicsimageio 4.9.4
  • aicspylibczi 3.1.0
  • autoflake 2.0.2
  • bfio 2.3.0
  • bioformats-jar-2020.5.27
  • black 23.1.0
  • editables 0.3
  • elementpath 2.5.3
  • fsspec 2022.11.0
  • hatch-fancy-pypi-readme-22.8.0
  • hatch-vcs-0.3.0
  • hatchling 1.13.0
  • imagecodecs 2023.1.23
  • imageio-ffmpeg-0.4.8
  • isort 5.12.0
  • jgo 1.0.5
  • JPype1 1.4.1
  • lxml 4.9.2
  • mrc 0.3.0
  • mypy-extensions-1.0.0
  • nd2 0.5.3
  • numpydoc 1.4.0
  • ome-types-0.3.3
  • ome-zarr-0.2.1
  • pathspec 0.11.1
  • Pint 0.20.1
  • pydantic 1.9.1
  • pyflakes 3.0.1
  • readlif 0.6.5
  • resource-backed-dask-array-0.1.0
  • scyjava 1.8.1
  • setuptools 61.3.1
  • tifffile 2023.2.3
  • tomli 2.0.1
  • wrapt 1.14.0
  • wurlitzer 3.0.3
  • xmlschema 1.4.1

More Information

For more information visit the aicsimageio website.

Dependencies

This version of aicsimageio has a direct dependency on: aiohttp/3.8.1-GCCcore-11.2.0 dask/2022.1.0-foss-2021b foss/2021b imageio/2.13.5-foss-2021b Java/11 lxml/4.6.3-GCCcore-11.2.0 Maven/3.6.3 Pillow/8.3.2-GCCcore-11.2.0 Python/3.9.6-GCCcore-11.2.0 scikit-image/0.19.1-foss-2021b SciPy-bundle/2021.10-foss-2021b typing-extensions/3.10.0.2-GCCcore-11.2.0 xarray/0.20.1-foss-2021b zarr/2.13.3-foss-2021b

Last modified on 28th March 2023