Deprecated: Use of this version of bcl2fastq2 is deprecated. More information on our Applications Support and Retention Policy.
There is a newer version of bcl2fastq2bcl2fastq Conversion Software both demultiplexes data and converts BCL files generated by Illumina sequencing systems to standard FASTQ file formats for downstream analysis.
Accessing bcl2fastq2 2.20.0-GCC-9.3.0
To load the module for bcl2fastq2 2.20.0-GCC-9.3.0 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):
module load bcl2fastq2/2.20.0-GCC-9.3.0
BEAR Apps Version
For more information visit the bcl2fastq2 website.
This version of bcl2fastq2 has a direct dependency on: GCC/9.3.0 zlib/1.2.11-GCCcore-9.3.0
This version of bcl2fastq2 is a direct dependent of: SpaceRanger/1.2.2-GCC-9.3.0
These versions of bcl2fastq2 are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.
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Last modified on 9th February 2021