Deprecated: Use of this version of canu is deprecated. More information on our Applications Support and Retention Policy.Canu is a fork of the Celera Assembler, designed for high-noise single-molecule sequencing (such as the PacBio RS II or Oxford Nanopore MinION). Canu is a hierarchical assembly pipeline which runs in four steps: Detect overlaps in high-noise sequences using MHAP Generate corrected sequence consensus Trim corrected sequences Assemble trimmed corrected sequences
Accessing canu 1.9-GCCcore-8.3.0-Perl-5.30.0
To load the module for canu 1.9-GCCcore-8.3.0-Perl-5.30.0 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):
module load canu/1.9-GCCcore-8.3.0-Perl-5.30.0
BEAR Apps Version
For more information visit the canu website.
This version of canu has a direct dependency on: GCCcore/8.3.0 gnuplot/5.2.8-GCCcore-8.3.0 Java/11 Perl/5.30.0-GCCcore-8.3.0
Last modified on 23rd January 2020