cellassign 520de59-fosscuda-2019b-Python-3.7.4-R-3.6.2
Deprecated: Use of this version of cellassign is deprecated. More information on our Applications Support and Retention Policy.
Automated, probabilistic assignment of cell types in scRNA-seq dataAccessing cellassign 520de59-fosscuda-2019b-Python-3.7.4-R-3.6.2
To load the module for cellassign 520de59-fosscuda-2019b-Python-3.7.4-R-3.6.2 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):
module load cellassign/520de59-fosscuda-2019b-Python-3.7.4-R-3.6.2
There is a CPU version of this module: cellassign 520de59-foss-2019b-Python-3.7.4-R-3.6.2
BEAR Apps Version
Extensions
- cellassign 520de59
- tfprobability 0.8.0.0
More Information
For more information visit the cellassign website.
Dependencies
This version of cellassign has a direct dependency on: fosscuda/2019b Python/3.7.4-GCCcore-8.3.0 R/3.6.2-fosscuda-2019b R-bundle-Bioconductor/3.10-fosscuda-2019b-R-3.6.2 R-keras/2.2.5.0-fosscuda-2019b-Python-3.7.4-R-3.6.2 tensorflow_probability/0.8.0-fosscuda-2019b-Python-3.7.4
Required By
This version of cellassign is a direct dependent of: BEAR-R-bio/2019b-fosscuda-2019b-R-3.6.2-ppc64le BEAR-R-bio/2019b-fosscuda-2019b-R-3.6.2
Other Versions
These versions of cellassign are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.
Version | BEAR Apps Version |
---|---|
520de59-foss-2019b-Python-3.7.4-R-3.6.2 | 2019b |
Last modified on 13th January 2020