clusterProfiler 4.4.4-foss-2021b-R-4.2.0

Deprecated: Use of this version of clusterProfiler is deprecated. More information on our Applications Support and Retention Policy.

statistical analysis and visualization of functional profiles for genes and gene clusters

Accessing clusterProfiler 4.4.4-foss-2021b-R-4.2.0

To load the module for clusterProfiler 4.4.4-foss-2021b-R-4.2.0 please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load clusterProfiler/4.4.4-foss-2021b-R-4.2.0

BEAR Apps Version

2018b

Extensions

  • aplot 0.1.8
  • clusterProfiler 4.4.4
  • DO.db 2.9
  • DOSE 3.22.1
  • enrichplot 1.16.2
  • ggfun 0.0.7
  • ggplotify 0.1.0
  • ggtree 3.4.4
  • GOSemSim 2.22.0
  • gridGraphics-0.5-1
  • scatterpie 0.1.8
  • shadowtext 0.1.2
  • tidytree 0.4.1
  • treeio 1.20.2
  • yulab.utils 0.0.5

More Information

For more information visit the clusterProfiler website.

Dependencies

This version of clusterProfiler has a direct dependency on: foss/2021b R/4.2.0-foss-2021b R-bundle-Bioconductor/3.15-foss-2021b-R-4.2.0

Required By

This version of clusterProfiler is a direct dependent of: BEAR-R-bio/2021b-foss-2021b-R-4.2.0

Other Versions

These versions of clusterProfiler are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Version BEAR Apps Version
3.16.1-foss-2020b-R-4.0.3 2020b

Last modified on 13th October 2022