BEAR Applications

mne 0.17.2-foss-2018b-Python-3.6.6

Deprecated: Use of this version of mne is deprecated. More information on our Applications Support and Retention Policy.

Open-source Python software for exploring, visualizing, and analyzing human neurophysiological data: MEG, EEG, sEEG, ECoG, and more.

Accessing mne 0.17.2-foss-2018b-Python-3.6.6

To load the module for mne 0.17.2-foss-2018b-Python-3.6.6 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load mne/0.17.2-foss-2018b-Python-3.6.6

There is a GPU enabled version of this module: mne 0.17.2-fosscuda-2018b-Python-3.6.6

BEAR Apps Version

2018b

Architectures

EL8-haswell — Ubuntu20.04-haswell

The listed architectures consist of two part: OS-CPU.

• BlueBEAR: The OS used on BlueBEAR is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
• BEAR and CaStLeS Cloud VMs: These VMs can have one of two OSes. Those with access to a BEAR Cloud or CaStLeS VM should check that the listed architectures for an application include the OS of VM being used. The VMs, irrespective of OS, will use the haswell CPU type.

Extensions

• dipy 0.16.0
• mne 0.17.2
• numexpr 2.6.9
• python-picard-0.4

More Information

For more information visit the mne website.

Dependencies

This version of mne has a direct dependency on: foss/2018b h5py/2.8.0-foss-2018b-Python-3.6.6 matplotlib/3.0.0-foss-2018b-Python-3.6.6 mayavi/4.6.2-foss-2018b-Python-3.6.6 NiBabel/2.3.0-foss-2018b-Python-3.6.6 PyQt5/5.11.3-foss-2018b-Python-3.6.6 Python/3.6.6-foss-2018b scikit-learn/0.20.0-foss-2018b-Python-3.6.6 VTK/8.1.1-foss-2018b-Python-3.6.6

Other Versions

These versions of mne are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 5th October 2020