pytabix 0.1-foss-2019b-Python-2.7.16

Deprecated: Use of this version of pytabix is deprecated. More information on our Applications Support and Retention Policy.

This module allows fast random access to files compressed with bgzip and indexed by tabix. It includes a C extension with code from klib. The bgzip and tabix programs are available here.

Accessing pytabix 0.1-foss-2019b-Python-2.7.16

To load the module for pytabix 0.1-foss-2019b-Python-2.7.16 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load pytabix/0.1-foss-2019b-Python-2.7.16

BEAR Apps Version

2018b

Extensions

  • pytabix 0.1

More Information

For more information visit the pytabix website.

Dependencies

This version of pytabix has a direct dependency on: foss/2019b Python/2.7.16-GCCcore-8.3.0

Last modified on 13th March 2020