CAGEr 1.34.0-foss-2021a-R-4.1.0

Analysis of CAGE (Cap Analysis of Gene Expression) sequencing data for precise mapping of transcription start sites and promoterome mining

Accessing CAGEr 1.34.0-foss-2021a-R-4.1.0

To load the module for CAGEr 1.34.0-foss-2021a-R-4.1.0 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load CAGEr/1.34.0-foss-2021a-R-4.1.0

BEAR Apps Version

2019a

Extensions

  • CAGEr 1.34.0
  • MultiAssayExperiment 1.18.0

More Information

For more information visit the CAGEr website.

Dependencies

This version of CAGEr has a direct dependency on: foss/2021a R/4.1.0-foss-2021a R-bundle-Bioconductor/3.13-foss-2021a-R-4.1.0

Last modified on 9th May 2022