LongRanger 2.2.2

Long Ranger is a set of analysis pipelines that processes Chromium sequencing output to align reads and call and phase SNPs, indels, and structural variants. There are five main pipelines, each triggered by a longranger command

Accessing LongRanger 2.2.2

To load the module for LongRanger 2.2.2 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load LongRanger/2.2.2

BEAR Apps Version

2019a

More Information

For more information visit the LongRanger website.

Dependencies

This version of LongRanger has a direct dependency on: Java/1.8

Required By

This version of LongRanger is a direct dependent of: HAPDeNovo/fe8bcc2-foss-2018b-Python-3.6.6

Last modified on 26th July 2019