Roary 3.13.0-foss-2020a

Rapid large-scale prokaryote pan genome analysis

Accessing Roary 3.13.0-foss-2020a

To load the module for Roary 3.13.0-foss-2020a please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load Roary/3.13.0-foss-2020a

BEAR Apps Version

2019a

More Information

For more information visit the Roary website.

Dependencies

This version of Roary has a direct dependency on: BEDTools/2.29.2-GCC-9.3.0 BioPerl/1.7.7-GCCcore-9.3.0 BLAST+/2.10.1-gompi-2020a CD-HIT/4.8.1-GCC-9.3.0 FastTree/2.1.11-GCCcore-9.3.0 foss/2020a Kraken/1.1.1-GCCcore-9.3.0 MCL/14.137-GCCcore-9.3.0 parallel/20200522-GCCcore-9.3.0 Perl/5.30.2-GCCcore-9.3.0 PRANK/170427-GCC-9.3.0 R/4.0.0-foss-2020a

Last modified on 10th November 2020