BEAR Applications

SHAPEIT4 4.2.1-foss-2020b

SHAPEIT4 is a fast and accurate method for estimation of haplotypes (aka phasing) for SNP array and high coverage sequencing data.

Accessing SHAPEIT4 4.2.1-foss-2020b

To load the module for SHAPEIT4 4.2.1-foss-2020b please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load SHAPEIT4/4.2.1-foss-2020b

BEAR Apps Version

2019a

More Information

For more information visit the SHAPEIT4 website.

Dependencies

This version of SHAPEIT4 has a direct dependency on: Boost/1.74.0-GCC-10.2.0 bzip2/1.0.8-GCCcore-10.2.0 foss/2020b HTSlib/1.11-GCC-10.2.0 XZ/5.2.5-GCCcore-10.2.0 zlib/1.2.11-GCCcore-10.2.0

Last modified on 25th August 2021