BEAR Applications

StringTie 2.1.3-GCC-8.3.0

StringTie is a fast and highly efficient assembler of RNA-Seq alignments into potential transcripts.

Accessing StringTie 2.1.3-GCC-8.3.0

To load the module for StringTie 2.1.3-GCC-8.3.0 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load StringTie/2.1.3-GCC-8.3.0

BEAR Apps Version

2019a

More Information

For more information visit the StringTie website.

Dependencies

This version of StringTie has a direct dependency on: GCC/8.3.0 zlib/1.2.11-GCCcore-8.3.0

Required By

This version of StringTie is a direct dependent of: funannotate/1.8.1-foss-2019b-Python-2.7.16 funannotate/1.8.1-foss-2019b-Python-3.7.4

Last modified on 12th October 2020