mandrake 1.2.2-foss-2022a

Fast visualisation of the population structure of pathogens using Stochastic Cluster Embedding.

Accessing mandrake 1.2.2-foss-2022a

To load the module for mandrake 1.2.2-foss-2022a please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load mandrake/1.2.2-foss-2022a

BEAR Apps Version

2019a

Extensions

  • mandrake 1.2.2

More Information

For more information visit the mandrake website.

Dependencies

This version of mandrake has a direct dependency on: Boost/1.79.0-GCC-11.3.0 Eigen/3.4.0-GCCcore-11.3.0 FFmpeg/4.4.2-GCCcore-11.3.0 foss/2022a h5py/3.7.0-foss-2022a HDBSCAN/0.8.29-foss-2022a matplotlib/3.5.2-foss-2022a plotly.py/5.12.0-GCCcore-11.3.0 pp-sketchlib/2.1.1-foss-2022a pybind11/2.9.2-GCCcore-11.3.0 Python/3.10.4-GCCcore-11.3.0 scikit-learn/1.1.2-foss-2022a SciPy-bundle/2022.05-foss-2022a tqdm/4.64.0-GCCcore-11.3.0

Required By

This version of mandrake is a direct dependent of: poppunk/2.6.1-foss-2022a

Last modified on 15th November 2023