rMATS-turbo 4.1.1-foss-2020b

rMATS turbo is the C/Cython version of rMATS (refer to http://rnaseq-mats.sourceforge.net).

Accessing rMATS-turbo 4.1.1-foss-2020b

To load the module for rMATS-turbo 4.1.1-foss-2020b please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load rMATS-turbo/4.1.1-foss-2020b

BEAR Apps Version

2019a

More Information

For more information visit the rMATS-turbo website.

Dependencies

This version of rMATS-turbo has a direct dependency on: BamTools/2.5.1-GCC-10.2.0 foss/2020b GSL/2.6-GCC-10.2.0 Python/3.8.6-GCCcore-10.2.0 SAMtools/1.11-GCC-10.2.0 SciPy-bundle/2020.11-foss-2020b STAR/2.7.6a-GCC-10.2.0

Last modified on 5th May 2023