DeepCell 0.11.1-foss-2021b-CUDA-11.4.1
deepcell-tf is a deep learning library for single-cell analysis of biological images.This library allows users to apply pre-existing models to imaging data as well as to develop new deep learning models for single-cell analysis.Accessing DeepCell 0.11.1-foss-2021b-CUDA-11.4.1
To load the module for DeepCell 0.11.1-foss-2021b-CUDA-11.4.1 please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):
module load DeepCell/0.11.1-foss-2021b-CUDA-11.4.1
BEAR Apps Version
Extensions
- DeepCell 0.11.1
- DeepCell-Toolbox-0.11.2
- DeepCell-Tracking-0.5.7
- pydot 1.4.2
- tensorflow-addons-0.17.0
- typeguard 2.13.3
More Information
For more information visit the DeepCell website.
Dependencies
This version of DeepCell has a direct dependency on: CUDA/11.4.1 foss/2021b Graphviz/2.50.0-GCCcore-11.2.0 IPython/7.26.0-GCCcore-11.2.0 matplotlib/3.4.3-foss-2021b OpenCV/4.5.5-foss-2021b-contrib Python/3.9.6-GCCcore-11.2.0 scikit-image/0.19.1-foss-2021b scikit-learn/1.0.1-foss-2021b spektral/1.1.0-foss-2021b-CUDA-11.4.1 TensorFlow/2.7.1-foss-2021b-CUDA-11.4.1 tqdm/4.62.3-GCCcore-11.2.0
Last modified on 17th March 2023