MAJIQ 2.2-foss-2020a-54fd98d-Python-3.8.2

MAJIQ and Voila are two software packages that together detect, quantify, and visualize local splicing variations (LSV) from RNA-Seq data.

Accessing MAJIQ 2.2-foss-2020a-54fd98d-Python-3.8.2

To load the module for MAJIQ 2.2-foss-2020a-54fd98d-Python-3.8.2 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load MAJIQ/2.2-foss-2020a-54fd98d-Python-3.8.2

BEAR Apps Version

2019b

Extensions

  • Click 7.0
  • Cython 0.29.14
  • Flask 1.0.2
  • Flask-Session-0.3.1
  • Flask-WTF-0.14.2
  • gitdb2 2.0.6
  • GitPython 3.0.5
  • gunicorn 19.9.0
  • itsdangerous 1.1.0
  • Jinja2 2.11.1
  • MAJIQ 2.2
  • numpy 1.18.1
  • psutil 5.6.7
  • smmap2 2.0.5
  • waitress 1.1.0
  • Werkzeug 0.16.0
  • WTForms 2.2.1

More Information

For more information visit the MAJIQ website.

Dependencies

This version of MAJIQ has a direct dependency on: foss/2020a h5py/2.10.0-foss-2020a-Python-3.8.2 HTSlib/1.10.2-GCC-9.3.0 Python/3.8.2-GCCcore-9.3.0 SciPy-bundle/2020.03-foss-2020a-Python-3.8.2

Last modified on 25th February 2021