MEGAHIT 1.2.8-GCCcore-8.3.0

There is a newer install of MEGAHIT

An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph

Accessing MEGAHIT 1.2.8-GCCcore-8.3.0

To load the module for MEGAHIT 1.2.8-GCCcore-8.3.0 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load MEGAHIT/1.2.8-GCCcore-8.3.0

BEAR Apps Version

2019b

Architectures

EL8-cascadelake — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two parts: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the MEGAHIT website.

Dependencies

This version of MEGAHIT has a direct dependency on: bzip2/1.0.8-GCCcore-8.3.0 GCCcore/8.3.0 gzip/1.10-GCCcore-8.3.0 Python/2.7.16-GCCcore-8.3.0 Python/3.7.4-GCCcore-8.3.0

This version of MEGAHIT is compatible with multiple vesions of Python. At any time, only one of the versions of Python can be active and the desired version of Python should be loaded before loading this version of MEGAHIT.

Required By

This version of MEGAHIT is a direct dependent of: shovill/1.1.0-foss-2019b-Python-3.7.4

Other Versions

These versions of MEGAHIT are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 11th November 2020