aicsimageio 4.9.4-foss-2021b

Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Pure Python

Accessing aicsimageio 4.9.4-foss-2021b

To load the module for aicsimageio 4.9.4-foss-2021b please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load aicsimageio/4.9.4-foss-2021b

BEAR Apps Version

2019b

Extensions

  • aicsimageio 4.9.4
  • aicspylibczi 3.1.0
  • autoflake 2.0.2
  • bfio 2.3.0
  • bioformats-jar-2020.5.27
  • black 23.1.0
  • editables 0.3
  • elementpath 2.5.3
  • fsspec 2022.11.0
  • hatch-fancy-pypi-readme-22.8.0
  • hatch-vcs-0.3.0
  • hatchling 1.13.0
  • imagecodecs 2023.1.23
  • imageio-ffmpeg-0.4.8
  • isort 5.12.0
  • jgo 1.0.5
  • JPype1 1.4.1
  • lxml 4.9.2
  • mrc 0.3.0
  • mypy-extensions-1.0.0
  • nd2 0.5.3
  • numpydoc 1.4.0
  • ome-types-0.3.3
  • ome-zarr-0.2.1
  • pathspec 0.11.1
  • Pint 0.20.1
  • pydantic 1.9.1
  • pyflakes 3.0.1
  • readlif 0.6.5
  • resource-backed-dask-array-0.1.0
  • scyjava 1.8.1
  • setuptools 61.3.1
  • tifffile 2023.2.3
  • tomli 2.0.1
  • wrapt 1.14.0
  • wurlitzer 3.0.3
  • xmlschema 1.4.1

More Information

For more information visit the aicsimageio website.

Dependencies

This version of aicsimageio has a direct dependency on: aiohttp/3.8.1-GCCcore-11.2.0 dask/2022.1.0-foss-2021b foss/2021b imageio/2.13.5-foss-2021b Java/11 lxml/4.6.3-GCCcore-11.2.0 Maven/3.6.3 Pillow/8.3.2-GCCcore-11.2.0 Python/3.9.6-GCCcore-11.2.0 scikit-image/0.19.1-foss-2021b SciPy-bundle/2021.10-foss-2021b typing-extensions/3.10.0.2-GCCcore-11.2.0 xarray/0.20.1-foss-2021b zarr/2.13.3-foss-2021b

Last modified on 28th March 2023