deepTools 3.5.0-foss-2020a-Python-3.8.2

There is a newer version of deepTools

deepTools is a suite of python tools particularly developed for the efficient analysis of high-throughput sequencing data, such as ChIP-seq, RNA-seq or MNase-seq.

Accessing deepTools 3.5.0-foss-2020a-Python-3.8.2

To load the module for deepTools 3.5.0-foss-2020a-Python-3.8.2 please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load deepTools/3.5.0-foss-2020a-Python-3.8.2

BEAR Apps Version

2019b

Extensions

  • deepTools 3.5.0
  • deeptoolsintervals 0.1.9
  • numpydoc 1.1.0
  • py2bit 0.3.0
  • pyBigWig 0.3.17

More Information

For more information visit the deepTools website.

Dependencies

This version of deepTools has a direct dependency on: foss/2020a matplotlib/3.2.1-foss-2020a-Python-3.8.2 plotly.py/4.8.1-GCCcore-9.3.0 Pysam/0.16.0.1-GCC-9.3.0 Python/3.8.2-GCCcore-9.3.0

Required By

This version of deepTools is a direct dependent of: RGT/0.13.2-foss-2020a-Python-3.8.2

Other Versions

These versions of deepTools are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Version BEAR Apps Version
3.5.2-foss-2022a 2022a

Last modified on 3rd December 2020