foss 2022b

GNU Compiler Collection (GCC) based compiler toolchain, including OpenMPI for MPI support, OpenBLAS (BLAS and LAPACK support), FFTW and ScaLAPACK.

Accessing foss 2022b

To load the module for foss 2022b please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load foss/2022b

BEAR Apps Version

2019b

More Information

For more information visit the foss website.

Dependencies

This version of foss has a direct dependency on: FFTW/3.3.10-GCC-12.2.0 FFTW.MPI/3.3.10-gompi-2022b FlexiBLAS/3.2.1-GCC-12.2.0 GCC/12.2.0 OpenMPI/4.1.4-GCC-12.2.0 ScaLAPACK/2.2.0-gompi-2022b-fb

Required By

This version of foss is a direct dependent of: ALAMODE/1.4.2-foss-2022b Armadillo/11.4.3-foss-2022b arpack-ng/3.8.0-foss-2022b arrow-R/11.0.0.3-foss-2022b-R-4.3.1 autograd/1.6.3-foss-2022b BEAR-Python-MSc-Bioinformatics/2022b-foss-2022b BEAR-R-bio/2022b-foss-2022b-R-4.3.1 Biopython/1.81-foss-2022b BioServices/1.11.2-foss-2022b bokeh/3.2.1-foss-2022b celldex/1.10.1-foss-2022b-R-4.3.1 cma/3.3.0-foss-2022b coexist/0.3.2-foss-2022b dask/2023.7.1-foss-2022b dcm2bids/3.1.1-foss-2022b deal.II/9.5.1-foss-2022b deal.II/9.5.1-foss-2022b-muparser ELPA/2022.05.001-foss-2022b faahKO/1.40.0-foss-2022b-R-4.3.1 GDAL/3.6.2-foss-2022b ggfortify/0.4.16-foss-2022b-R-4.3.1 gprofiler-official/1.0.0-foss-2022b graphviz/0.20.1-foss-2022b h5py/3.8.0-foss-2022b Harminv/1.4.2-foss-2022b HPL/2.3-foss-2022b imageio/2.31.1-foss-2022b iRF/3.0.0-foss-2022b-R-4.3.1 IRkernel/1.3.2-foss-2022b-R-4.3.1 kinbot/2.2.1-foss-2022b Lethe/20230901-foss-2022b Lethe/20231028-foss-2022b maftools/2.16.0-foss-2022b-R-4.3.1 MAST/1.26.0-foss-2022b-R-4.3.1 Meep/1.28.0-foss-2022b MOFA2/1.10.0-foss-2022b-R-4.3.1 mofapy2/0.7.0-foss-2022b monocle/2.28.0-foss-2022b-R-4.3.1 MPB/1.11.1-foss-2022b msPurity/1.26.0-foss-2022b-R-4.3.1 MSstats/4.8.6-foss-2022b-R-4.3.1 mvlearn/0.5.0-foss-2022b NLopt/2.7.1-foss-2022b-Python NLTK/3.8.1-foss-2022b occt/7.7.0-foss-2022b OpenCV/4.8.0-foss-2022b-contrib ottr/1.4.0-foss-2022b-R-4.3.1 p4est/2.3.6-foss-2022b pandaR/1.32.0-foss-2022b-R-4.3.1 pept/0.5.1-foss-2022b PICI-LIGGGHTS/3.8.1-foss-2022b polars/0.19.12-foss-2022b PyTorch/1.13.1-foss-2022b pyvis/0.3.1-foss-2022b pyvista/0.41.1-foss-2022b QuantumESPRESSO/7.2-foss-2022b R/4.3.1-foss-2022b R-bundle-Bioconductor/3.17-foss-2022b-R-4.3.1 RDKit/2023.03.3-foss-2022b scikit-image/0.21.0-foss-2022b scikit-plot/0.3.7-foss-2022b SDMtune/1.3.1-foss-2022b-R-4.3.1 Seaborn/0.12.2-foss-2022b sequenza/3.0.0-foss-2022b sequenza-utils/3.0.0-foss-2022b ShortStack/4.0.2-foss-2022b ShortTracks/1.1-foss-2022b SignalP/6.0h-foss-2022b-fast smotefamily/1.3.1-foss-2022b-R-4.3.1 strucVis/0.7-foss-2022b SuiteSparse/5.13.0-foss-2022b-METIS-5.1.0 SUNDIALS/6.6.0-foss-2022b Trilinos/14.4.0-foss-2022b ViennaRNA/2.6.4-foss-2022b VTK/9.2.6-foss-2022b wittgenstein/0.3.4-foss-2022b

Other Versions

These versions of foss are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 14th July 2023