There is a newer version of h5pyHDF5 for Python (h5py) is a general-purpose Python interface to the Hierarchical Data Format library, version 5. HDF5 is a versatile, mature scientific software library designed for the fast, flexible storage of enormous amounts of data.
Accessing h5py 2.10.0-foss-2019a
To load the module for h5py 2.10.0-foss-2019a please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):
module load h5py/2.10.0-foss-2019a
There is a GPU enabled version of this module: h5py 2.10.0-fosscuda-2019a
BEAR Apps Version
For more information visit the h5py website.
This version of h5py has a direct dependency on: foss/2019a HDF5/1.10.5-gompi-2019a Python/2.7.15-GCCcore-8.2.0 Python/3.7.2-GCCcore-8.2.0 SciPy-bundle/2019.03-foss-2019a
This version of h5py is compatible with multiple vesions of Python. At any time, only one of the versions of Python can be active and the desired version of Python should be loaded before loading this version of h5py.
This version of h5py is a direct dependent of: ELMoForManyLangs/0.0.2-foss-2019a-Python-3.7.2 FMRIprep/20.2.0-foss-2019a-Python-3.7.2 hdf5storage/0.1.15-foss-2019a Keras/2.2.4-foss-2019a-Python-3.7.2 MNE-Python/0.19.1-foss-2019a-Python-3.7.2 TensorFlow/1.13.1-foss-2019a-Python-3.7.2 TensorFlow/1.14.0-foss-2019a-Python-3.7.2 tombo/1.5-foss-2019a-Python-3.7.2 velocyto/0.17.17-foss-2019a-Python-3.7.2
These versions of h5py are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.
Last modified on 13th September 2019