BEAR Applications

pybedtools 0.8.2-GCC-11.2.0

Python wrapper -- and more -- for Aaron Quinlan's BEDTools (bioinformatics tools)

Accessing pybedtools 0.8.2-GCC-11.2.0

To load the module for pybedtools 0.8.2-GCC-11.2.0 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load pybedtools/0.8.2-GCC-11.2.0

BEAR Apps Version

2019b

More Information

For more information visit the pybedtools website.

Dependencies

This version of pybedtools has a direct dependency on: BEDTools/2.30.0-GCC-11.2.0 GCC/11.2.0 Pysam/0.17.0-GCC-11.2.0 Python/3.9.6-GCCcore-11.2.0

Required By

This version of pybedtools is a direct dependent of: ecc_finder/1.0.0_20221007_67d06f3-foss-2021b TALON/20230209-foss-2021b TOBIAS/0.13.3-foss-2021b

Other Versions

These versions of pybedtools are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 23rd August 2022