seqtk 1.3-GCC-8.3.0

There is a newer install of seqtk

Seqtk is a fast and lightweight tool for processing sequences in the FASTA or FASTQ format. It seamlessly parses both FASTA and FASTQ files which can also be optionally compressed by gzip.

Accessing seqtk 1.3-GCC-8.3.0

To load the module for seqtk 1.3-GCC-8.3.0 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load seqtk/1.3-GCC-8.3.0

BEAR Apps Version

2019b

Architectures

EL8-cascadelakeEL8-icelakeEL8-sapphirerapids

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the seqtk website.

Dependencies

This version of seqtk has a direct dependency on: GCC/8.3.0 zlib/1.2.11-GCCcore-8.3.0

Required By

This version of seqtk is a direct dependent of: shovill/1.1.0-foss-2019b-Python-3.7.4 snippy/4.6.0-foss-2019b-Perl-5.30.0

Other Versions

These versions of seqtk are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Version BEAR Apps Version
1.3-GCC-11.2.0 2021b

Last modified on 10th November 2020