vcf2maf 1.6.18-foss-2019b-Perl-5.30.0

Convert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms.

Accessing vcf2maf 1.6.18-foss-2019b-Perl-5.30.0

To load the module for vcf2maf 1.6.18-foss-2019b-Perl-5.30.0 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load vcf2maf/1.6.18-foss-2019b-Perl-5.30.0

BEAR Apps Version

2019b

Architectures

EL8-cascadelake — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the vcf2maf website.

Dependencies

This version of vcf2maf has a direct dependency on: foss/2019b Perl/5.30.0-GCCcore-8.3.0 SAMtools/1.10-GCC-8.3.0 VEP/99.2-foss-2019b-Perl-5.30.0

Last modified on 5th October 2020