velocyto 0.17.17-foss-2021a
Velocyto is a library for the analysis of RNA velocity.Accessing velocyto 0.17.17-foss-2021a
To load the module for velocyto 0.17.17-foss-2021a please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):
module load velocyto/0.17.17-foss-2021a
BEAR Apps Version
Extensions
- loompy 3.0.6
- numpy_groupies 0.9.13
- velocyto 0.17.17
More Information
For more information visit the velocyto website.
Dependencies
This version of velocyto has a direct dependency on: foss/2021a h5py/3.2.1-foss-2021a matplotlib/3.4.2-foss-2021a numba/0.53.1-foss-2021a Pysam/0.16.0.1-GCC-10.3.0 Python/3.9.5-GCCcore-10.3.0 scikit-learn/0.24.2-foss-2021a SciPy-bundle/2021.05-foss-2021a
Other Versions
These versions of velocyto are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.
Version | BEAR Apps Version |
---|---|
0.17.17-foss-2019a-Python-3.7.2 | 2019a |
Last modified on 11th May 2022