BCFtools 1.9-foss-2019a

Unsupported: Use of this version of BCFtools is not supported. More information on our Applications Support and Retention Policy.

There is a newer version of BCFtools

Samtools is a suite of programs for interacting with high-throughput sequencing data. BCFtools - Reading/writing BCF2/VCF/gVCF files and calling/filtering/summarising SNP and short indel sequence variants

Accessing BCFtools 1.9-foss-2019a

To load the module for BCFtools 1.9-foss-2019a please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load bear-apps-unsupported/handbuilt/2019
module load BCFtools/1.9-foss-2019a

BEAR Apps Version

2019h

More Information

For more information visit the BCFtools website.

Dependencies

This version of BCFtools has a direct dependency on: bzip2/1.0.6-GCCcore-8.2.0 foss/2019a GSL/2.5-GCC-8.2.0-2.31.1 HTSlib/1.9-foss-2019a XZ/5.2.4-GCCcore-8.2.0 zlib/1.2.11-GCCcore-8.2.0

Other Versions

These versions of BCFtools are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 19th August 2019