BioPerl 1.7.8-GCCcore-11.2.0

Unsupported: Use of this version of BioPerl is not supported. More information on our Applications Support and Retention Policy.

There is a newer version of BioPerl

Bioperl is the product of a community effort to produce Perl code which is useful in biology. Examples include Sequence objects, Alignment objects and database searching objects.

Accessing BioPerl 1.7.8-GCCcore-11.2.0

To load the module for BioPerl 1.7.8-GCCcore-11.2.0 please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load bear-apps-unsupported/handbuilt/2019
module load BioPerl/1.7.8-GCCcore-11.2.0

BEAR Apps Version

2019h

Extensions

  • Bio::Procedural 1.7.4
  • BioPerl 1.7.8
  • XML::DOM::XPath 0.14
  • XML::Writer 0.900

More Information

For more information visit the BioPerl website.

Dependencies

This version of BioPerl has a direct dependency on: DB_File/1.857-GCCcore-11.2.0 GCCcore/11.2.0 Perl/5.34.0-GCCcore-11.2.0 XML-LibXML/2.0207-GCCcore-11.2.0

Required By

This version of BioPerl is a direct dependent of: Bio-SearchIO-hmmer/1.7.3-GCC-11.2.0 prokka/1.14.5-gompi-2021b

Other Versions

These versions of BioPerl are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 10th February 2023