GBJ 0.5.0-foss-2019b-R-3.6.2

Unsupported: Use of this version of GBJ is not supported. More information on our Applications Support and Retention Policy.

GBJ offers the Generalized Berk-Jones (GBJ) test for set-based inference in genetic association studies. The GBJ is designed as an alternative to tests such as Berk-Jones (BJ), Higher Criticism (HC), Generalized Higher Criticism (GHC), Minimum p-value (minP), and Sequence Kernel Association Test (SKAT).

Accessing GBJ 0.5.0-foss-2019b-R-3.6.2

To load the module for GBJ 0.5.0-foss-2019b-R-3.6.2 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load bear-apps-unsupported/handbuilt/2019
module load GBJ/0.5.0-foss-2019b-R-3.6.2

BEAR Apps Version

2019h

Extensions

  • GBJ 0.5.0

More Information

For more information visit the GBJ website.

Dependencies

This version of GBJ has a direct dependency on: foss/2019b R/3.6.2-foss-2019b

Required By

This version of GBJ is a direct dependent of: UTMOST/88e9d1d-foss-2019b-Python-2.7.16-R-3.6.2

Last modified on 8th February 2021