Unsupported: Use of this version of GMAP-GSNAP is not supported. More information on our Applications Support and Retention Policy.GMAP: A Genomic Mapping and Alignment Program for mRNA and EST Sequences GSNAP: Genomic Short-read Nucleotide Alignment Program
Accessing GMAP-GSNAP 2020-09-12-foss-2019b
To load the module for GMAP-GSNAP 2020-09-12-foss-2019b please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):
module load bear-apps-unsupported/handbuilt/2019
module load GMAP-GSNAP/2020-09-12-foss-2019b
BEAR Apps Version
For more information visit the GMAP-GSNAP website.
This version of GMAP-GSNAP has a direct dependency on: bzip2/1.0.8-GCCcore-8.3.0 foss/2019b zlib/1.2.11-GCCcore-8.3.0
This version of GMAP-GSNAP is a direct dependent of: funannotate/1.8.1-foss-2019b-Python-2.7.16 funannotate/1.8.1-foss-2019b-Python-3.7.4 PASApipeline/2.4.1-foss-2019b
These versions of GMAP-GSNAP are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.
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Last modified on 12th October 2020