InterProScan 5.55-88.0-foss-2021a

Unsupported: Use of this version of InterProScan is not supported. More information on our Applications Support and Retention Policy.

There is a newer version of InterProScan

InterProScan can be used to run the scanning algorithms from the InterPro database in an integrated way. Sequences are submitted in FASTA format. Matches are then calculated against all of the required member database's signatures and the results are then output in a variety of formats.

Accessing InterProScan 5.55-88.0-foss-2021a

To load the module for InterProScan 5.55-88.0-foss-2021a please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load bear-apps-unsupported/handbuilt/2019
module load InterProScan/5.55-88.0-foss-2021a

BEAR Apps Version

2019h

More Information

For more information visit the InterProScan website.

Dependencies

This version of InterProScan has a direct dependency on: foss/2021a Java/11 libgd/2.3.1-GCCcore-10.3.0 Perl/5.32.1-GCCcore-10.3.0 pftoolsV3/3.2.11-foss-2021a Python/3.9.5-GCCcore-10.3.0

Other Versions

These versions of InterProScan are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 16th March 2023